Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889858.1_cds_XP_016444533.1_39581
CDS Infomation

[gene=LOC107769792] [db_xref=GeneID:107769792] [protein=phosphatidylinositol/phosphatidylcholine transfer protein SFH13-like] [protein_id=XP_016444533.1] [location=join(125462..125468,125583..125880,126155..126254,126339..126605,127121..127198,127306..127442,128663..129086,129159..129233,130084..130104)] [gbkey=CDS]
Sequence

ATGTCAGAATGGTTGGATGCATATGATGACATAAGAGAAAGAAGATCAGACTTTGAGGTT
TCAGAGGATGAAAGACGGCGTTCCAGAATTGGTGCTTTCAAGAAAAAGGCATTAAATGCT
TCAAACAAGTTCACTCACTCTCTGAAGAAAAGAGGAAAAAGGAAAGTTGACTACAGGTTC
CCTTCAGTTTCAATAGCAGATGTACGTGACGCAAAAGAGGAGAATGCTGTCTGTGAATTG
CGTCAAAGGCTCCTTGAACGGAATTTGTTGCCACCCAGACATGATGACTACCATATGATG
TTGAGATTTTTGAAGGCAAGAGATCTTAATGTTGAGAAGACTATTCCGATGTGGGAAGAA
ATGCTTAACTGGAGGAAAGAGTATGGCGCAGACACAATATTGCAGGATTTTTACTTTGAA
GAGTTGGAAGAAGTATTGCAGTTTTACCCACAAGGATATCATGGAGTTGACAGGGAGGGA
AGGCCTGTTTATATCGAAAGGCTCGGACAAGCTCATCCCAACAAACTTATGCGGATCACC
ACGATTAATCGCTACTTGAAATATCATGTTCAAGAATTTGAAAGGGCACTACATGAGAAG
TTCCCTGCATGTTCTATTGCCGCAAAGAAAAGGATCTGCACAACAACTACAATTTTGGAT
GTGCAAGGCTTAGGGATTAAAAACTTCACAAGGACTGCTGCTAGTCTTTTGGCGGCCATG
GCAAAAATTGATAATAGCTATTATCCTGAGACACTGCATCGAATGTTCATTGTCAATGCT
GGCCCTGGCTTCAAAAAGATGCTCTGGCCAGCAGCTCAGAAATTTTTGGATGCAAAGACT
ATTGCCAAGATACAGGTAGTAGAGGAAANTATTCCCTTTTACTTTTTGTGGGATTCATGT
CCAGTATTCATGTGCTTTTTAGGTACCTGGGCAATTCGTTGGTGTGAAAGAATCCAAGAG
AAGATTTTTAGCAGTTGTTTCCGTTGTTTGGAAAGGAAACTGATTCCTTTCATACTCAAA
CTCTGTGCATTTATTCGTTGTCTGCCCTTTGAGTACTGGAGGAAACAGACAAATGTTTTC
CCGACTAATGCATTGGAAGAAAGGCAAGGGACCAGTTCGTCTGTTAATGATGAAGCAGTT
CAAAAAGTAAGGGAGGCCCATCCATGCATGCAGCGTCTTAATAGATTGGAAAATTTATTG
GAAGAAATAAACAAAAAGCCCGCTGAGATCCCAGCAGAGAAGGACCAAATGCTTCTGCAA
TCAATGGACAGGATCAAGTCTGTCGAGGTTGACCTAGATAAAACAAAAAGGGTATTGCAT
GCTACAGTGTTGAAGCAACTTGAAATTGCAGAGTTATTGGAGAACCTAAAAGAGTCGAGA
TTTCATAGGCGGAGTTTTTTGTGTTGA

Peptide Sequence

PEP ID

XP_016444533.1
PEP Infomation

PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH13-like [Nicotiana tabacum]
Sequence

MSEWLDAYDDIRERRSDFEVSEDERRRSRIGAFKKKALNASNKFTHSLKKRGKRKVDYRF
PSVSIADVRDAKEENAVCELRQRLLERNLLPPRHDDYHMMLRFLKARDLNVEKTIPMWEE
MLNWRKEYGADTILQDFYFEELEEVLQFYPQGYHGVDREGRPVYIERLGQAHPNKLMRIT
TINRYLKYHVQEFERALHEKFPACSIAAKKRICTTTTILDVQGLGIKNFTRTAASLLAAM
AKIDNSYYPETLHRMFIVNAGPGFKKMLWPAAQKFLDAKTIAKIQVVEEXIPFYFLWDSC
PVFMCFLGTWAIRWCERIQEKIFSSCFRCLERKLIPFILKLCAFIRCLPFEYWRKQTNVF
PTNALEERQGTSSSVNDEAVQKVREAHPCMQRLNRLENLLEEINKKPAEIPAEKDQMLLQ
SMDRIKSVEVDLDKTKRVLHATVLKQLEIAELLENLKESRFHRRSFLC

Transcript Sequence

Gene sequence data has not been registered.